Sensors for Biomechanics

Sensor Workshop wiki

Kinematics: Orientation, joint angles, velocity, acceleration

  • Orientation/tilt
    • Tilt switch
    • Digital compass
  • Joint angles (rotary motion)
    • Goniometer

  • Velocity (translation)
    • Inertial Measurement Unit
      • Q. Li, M. Young, V. Naing, and J. M. Donelan, “Walking speed estimation using a shank-mounted inertial measurement unit,” Journal of Biomechanics, vol. 43, no. 8, pp. 1640-1643, May 2010.
  • Velocity (angular)
    • Gyroscope
    • Anything under orientation (as long as you have time as well since velocity = change in angle/time elapsed)
  • Acceleration
    • Accelerometer

Kinetics: Forces and Torques

used to create the Telemyograph

  • Torque
    • Torque wrench? Just use Force and multiply by distance!

Other

Fitbit Lab

Follow this post from the Quantified Self blog

  • DO step 1
  • SKIP steps 2 and 3
  • DO step 4. Use these:
    • Consumer key: 2ccdced480d247828c30a8ee0626636d
    • Consumer secret: ac564afc15aa4cc990c72623794bdf28
  • DO steps 5 and 6

Graphing 101

  • Okay now you have data in a Google spreadsheet. Let’s graph it.
  • Select the first and second columns

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  •  Navigate to Insert –> Chart –> line charts option

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  • Insert. Done.

Graphing 102

  • Download as Excel

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  • Open Excel
  • Highlight first 3 columns

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  • Navigate to Insert–>Scatter–>Scatter with Straight Lines

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  • WTF!

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  • Right click on chart –> Select Data…

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  • Remove Date

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  • Edit steps and distance. Each should have dates as X values, and steps or distance as Y values

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  • Okay that’s better, but we need to change the Y axis values for the distance data

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  • Right click on the green line at the bottom that represents the distance data and choose –> Format Data Series…

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  • Choose Secondary Axis

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  • Much better! We can see how my steps and distance are almost completely overlapping.

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The Mifflin-St Jeor eqn is used to calculate calorie burn. We then take tracker data and factor that in as well for the users daily calorie burn totals. The exact “math” is not public.

  • M. Mifflin, S. St Jeor, L. Hill, B. Scott, S. Daugherty, and Y. Koh, “A new predictive equation for resting energy expenditure in healthy individuals,” The American Journal of Clinical Nutrition, vol. 51, no. 2, pp. 241 -247, Feb. 1990.

If a user had no Fitbit tracker data for the specific day we take the greater of Logged Activities + BMR (for minutes when there is no activity) and the calories calculated from the EER for that day (if EER enabled for this user’s profile). In case, there was some data from the tracker for the specific day, we use that data where available and for time where data is unavailable we use BMR. If the total is less than 20% greater than BMR then we use EER (cals < EER * 0.8). EER never used to calculate calories for today.

BMR Formula: We use standard MD Mifflin-St Jeor equation:
9.99 * weightKg + 6.25*heightCm – 4.92*ageYears + s, where s is +5 for males and -161 for female

EER Formula (TEE total energy expenditure):
Based on http://www.cdc.gov/pcd/issues/2006/oct/pdf/06_0034.pdf which in turn is based on “Food and Nutrition Board. Dietary reference intakes for energy, carbohydrate, fiber, fat, fatty acids, cholesterol, protein, and amino acids (macronutrients). Washington (DC): National Academy Press; 2005.” http://www.nap.edu/openbook.php?isbn=0309085373&page=204

MALE: TEE = 864 – 9.72 x age (years) + 1.0 x (14.2 x weight(kg) + 503 x height (meters))
FEMALE: TEE = 387 – 7.31 x age (years) + 1.0 x (10.9 x weight(kg) + 660.7 x height (meters))

Other Fitbit resources:

http://wiki.fitbit.com/display/API/Fitbit+API

http://dev.fitbit.com/:

http://github.com/qdot/libfitbit (also see http://www.openyou.org/)

 

 

Biomechanics Vocab and Basics

Quantify the qualitative (clinicians and designers vs. engineers)
Scalars vs. Vectors, bad jokes
Force (mass, wine, and elevators)
Friction (without it, we can’t walk)
Torque (embarrassing doors)

Relative motion: reference earth, bike, sun?
The cause of motion is a force
Two type of motion:

  1. Translation (linear)
    • Rectilinear
    • Curvilinear
  2. Rotation (angular)

Degrees of Freedom (Etch-A-Sketch, Planes)

Anatomical Planes

Sagittal plane: flexion/extension
Coronal/Frontal plane: abduction/adduction
Transverse plane

Anatomical Terms of Location

How muscles (in theory) generate force that’s transformed into joint torque that creates movement.

History of Biomechanics

What is Biomechanics
Borelli’s De motu animalium
A Geneology of Biomechanics

Eadweard Muybridge: How modern day gait analysis started with a bet, some cameras, and a horse.

  • before
  • after

He’s considered by some to be the father of biomechanics. Also, the father of something else…

History of the Study of Locomotion

Present day…

Biomechanic: Using Processing for 3D Human Movement Visualization and Comparison from Greg Borenstein on Vimeo.